chore: restore original directory structure (project under code-review-graph-main/)
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@@ -0,0 +1,380 @@
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"""Evaluation runner: orchestrates benchmark execution across repositories."""
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from __future__ import annotations
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import csv
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import logging
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import sqlite3
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import subprocess
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from datetime import date
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from pathlib import Path
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try:
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import yaml # type: ignore[import-untyped]
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except ImportError:
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yaml = None # type: ignore[assignment]
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from code_review_graph.eval.benchmarks import (
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agent_baseline,
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build_performance,
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flow_completeness,
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impact_accuracy,
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multi_hop_retrieval,
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search_quality,
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token_efficiency,
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)
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logger = logging.getLogger(__name__)
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BENCHMARK_REGISTRY = {
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"token_efficiency": token_efficiency.run,
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"impact_accuracy": impact_accuracy.run,
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"flow_completeness": flow_completeness.run,
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"search_quality": search_quality.run,
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"build_performance": build_performance.run,
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"multi_hop_retrieval": multi_hop_retrieval.run,
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"agent_baseline": agent_baseline.run,
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}
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CONFIGS_DIR = Path(__file__).parent / "configs"
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DEFAULT_OUTPUT = Path("evaluate/results")
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DEFAULT_REPOS = Path("evaluate/test_repos")
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def _require_yaml():
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if yaml is None:
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raise ImportError("pyyaml is required: pip install code-review-graph[eval]")
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def _validate_config(config: object, path: Path) -> dict:
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"""Validate snapshot invariants required for reproducible benchmarks."""
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if not isinstance(config, dict):
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raise ValueError(f"{path}: evaluation config must be a mapping")
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test_commits = config.get("test_commits", [])
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if test_commits:
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latest = test_commits[-1].get("sha")
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if not latest or config.get("commit") != latest:
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raise ValueError(
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f"{path}: commit pin must equal latest test_commit {latest}"
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)
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return config
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def load_config(name: str) -> dict:
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"""Load a single benchmark config by name."""
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_require_yaml()
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path = CONFIGS_DIR / f"{name}.yaml"
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with open(path) as f:
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return _validate_config(yaml.safe_load(f), path)
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def load_all_configs() -> list[dict]:
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"""Load all benchmark configs from the configs directory."""
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_require_yaml()
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configs = []
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for p in sorted(CONFIGS_DIR.glob("*.yaml")):
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with open(p) as f:
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configs.append(_validate_config(yaml.safe_load(f), p))
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return configs
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def _assert_standalone_repo(repo_path: Path) -> None:
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"""Refuse to run git commands against a dir that is not its own repository.
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``evaluate/test_repos/`` sits inside this project's own checkout. If a
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target directory exists but is not a git repository in its own right --
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an empty dir, a half-finished clone, or one whose ``.git`` points
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elsewhere -- then ``git -C <dir> ...`` silently walks up to the enclosing
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repository. The subsequent ``git checkout <pinned sha>`` then rewrites the
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developer's working tree instead of the test repo, discarding uncommitted
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work and resetting tracked files to an old commit.
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"""
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proc = subprocess.run(
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["git", "rev-parse", "--show-toplevel"],
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cwd=str(repo_path),
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capture_output=True,
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text=True,
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)
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toplevel = (
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Path(proc.stdout.strip()).resolve() if proc.returncode == 0 and proc.stdout.strip()
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else None
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)
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if toplevel != repo_path.resolve():
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raise RuntimeError(
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f"{repo_path} exists but is not a standalone git repository "
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f"(git resolves it to {toplevel or 'no repository'}). Refusing to "
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f"fetch or check out there, because those commands would operate on "
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f"the enclosing repository instead. Remove {repo_path} and re-run to "
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f"get a clean clone."
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)
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def clone_or_update(config: dict, repos_dir: Path | None = None) -> Path:
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"""Clone or update a repository at the config's pinned ``commit`` SHA.
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Full clones (no ``--depth``) are required: the pinned ``test_commits`` are
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often older than any reasonable shallow-clone window, and a missed SHA
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used to silently fall back to ``git diff HEAD~1 HEAD`` — producing
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benchmark numbers tied to whatever upstream HEAD looked like that day.
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Every subprocess call's exit status is checked; failures raise
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``RuntimeError`` so reproducibility issues surface immediately instead of
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yielding garbage results.
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"""
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repos_dir = repos_dir or DEFAULT_REPOS
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repos_dir.mkdir(parents=True, exist_ok=True)
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repo_path = repos_dir / config["name"]
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if repo_path.exists():
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_assert_standalone_repo(repo_path)
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proc = subprocess.run(
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["git", "fetch", "--all", "--tags"],
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cwd=str(repo_path),
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capture_output=True,
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text=True,
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)
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if proc.returncode != 0:
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raise RuntimeError(
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f"git fetch failed in {repo_path}: {proc.stderr.strip()}"
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)
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else:
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proc = subprocess.run(
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["git", "clone", config["url"], str(repo_path)],
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capture_output=True,
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text=True,
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)
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if proc.returncode != 0:
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raise RuntimeError(
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f"git clone failed for {config['url']}: {proc.stderr.strip()}"
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)
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commit = config.get("commit", "HEAD")
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if commit != "HEAD":
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proc = subprocess.run(
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["git", "checkout", commit],
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cwd=str(repo_path),
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capture_output=True,
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text=True,
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)
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if proc.returncode != 0:
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raise RuntimeError(
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f"git checkout {commit} failed in {repo_path}: "
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f"{proc.stderr.strip()}"
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)
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return repo_path
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def write_csv(results: list[dict], path: Path) -> None:
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"""Write benchmark results to a CSV file."""
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if not results:
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return
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path.parent.mkdir(parents=True, exist_ok=True)
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fieldnames = list(results[0].keys())
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with open(path, "w", newline="") as f:
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writer = csv.DictWriter(f, fieldnames=fieldnames)
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writer.writeheader()
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writer.writerows(results)
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#: Benchmarks that put a natural-language question through ``hybrid_search``.
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#: Without a vector index these fall back to FTS5, which scores a full
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#: sentence against no document and returns nothing.
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SEMANTIC_BENCHMARKS = frozenset(
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{"agent_baseline", "search_quality", "multi_hop_retrieval"},
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)
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def _embedding_count(store) -> int | None:
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"""Return the number of stored vectors, or None if the table is absent.
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Only a missing table is treated as "no index". A lock or a malformed
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database is a different failure and must not be reported to the user as
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"re-run with --embed", which would send them after the wrong problem.
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"""
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try:
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row = store._conn.execute("SELECT count(*) FROM embeddings").fetchone()
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except sqlite3.OperationalError as exc:
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if "no such table" in str(exc).lower():
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return None
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raise
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return int(row[0]) if row else 0
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def _build_embedding_index(
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store,
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db_path,
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provider: str | None,
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model: str | None,
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) -> None:
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"""Bootstrap the vector index for an already-built graph.
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Mirrors ``tools.docs.embed_graph``, but reads the graph through the
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runner's already-open ``GraphStore`` rather than opening a second one.
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``EmbeddingStore`` still opens its own connection to the same database —
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that is safe here because the two are used sequentially, not
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concurrently: vectors are written and orphans purged through the
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embedding connection, then nodes are read back through the graph
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connection. Both run in autocommit (``isolation_level=None``), so the
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reads see committed data with no transaction snapshot in between.
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"""
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from code_review_graph.embeddings import EmbeddingStore, embed_all_nodes
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try:
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emb_store = EmbeddingStore(db_path, provider=provider, model=model)
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except ValueError as exc:
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logger.error(" embedding index unavailable: %s", exc)
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return
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try:
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if not emb_store.available:
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logger.error(
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" embedding provider %r is not available — install "
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"code-review-graph[embeddings] for the local provider, or "
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"check the cloud provider's environment variables. "
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"Semantic benchmarks will report no_graph_results.",
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provider or "local",
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)
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return
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embedded = embed_all_nodes(store, emb_store)
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logger.info(
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" embedding index: %d new vector(s), %d total",
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embedded,
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emb_store.count(),
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)
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finally:
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emb_store.close()
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def _warn_if_semantic_index_missing(store, benchmark_names: list[str]) -> None:
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"""Warn before running a semantic benchmark against an unindexed graph.
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The failure is otherwise silent: rows come back ``no_graph_results`` and
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``aggregate()`` excludes them, so the run reports ``median: None`` rather
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than an error.
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"""
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requested = SEMANTIC_BENCHMARKS.intersection(benchmark_names)
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if not requested or _embedding_count(store):
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return
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logger.warning(
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" no vector index — %s will score natural-language questions "
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"against FTS5 alone and return zero hits. Re-run with --embed.",
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", ".join(sorted(requested)),
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)
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def run_eval(
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repos: list[str] | None = None,
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benchmarks: list[str] | None = None,
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output_dir: str | Path | None = None,
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embed: bool = False,
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embedding_provider: str | None = None,
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embedding_model: str | None = None,
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) -> dict[str, list[dict]]:
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"""Run evaluation benchmarks across repositories.
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Args:
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repos: List of repo config names to evaluate (None = all).
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benchmarks: List of benchmark names to run (None = all).
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output_dir: Directory for CSV output files.
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embed: Build the vector index after the graph build. Default off,
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because the local provider loads a model and cloud providers
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transmit source-derived text and may incur API cost. Benchmarks
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that put a natural-language question through ``hybrid_search``
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(``agent_baseline``, ``search_quality``, ``multi_hop_retrieval``)
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need this — FTS5 alone matches nothing on a full sentence.
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embedding_provider: Provider for the index (default ``local``).
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embedding_model: Exact model (default: provider's own default).
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Returns:
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Dict mapping ``{repo}_{benchmark}`` to list of result dicts.
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"""
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output_dir = Path(output_dir) if output_dir else DEFAULT_OUTPUT
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output_dir.mkdir(parents=True, exist_ok=True)
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if repos:
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configs = [load_config(r) for r in repos]
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else:
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configs = load_all_configs()
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benchmark_names = benchmarks or list(BENCHMARK_REGISTRY.keys())
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all_results: dict[str, list[dict]] = {}
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today = date.today().isoformat()
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for config in configs:
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name = config["name"]
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logger.info("Evaluating %s...", name)
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# Resolve the repo path to an absolute Path before handing it to
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# full_build / get_db_path so the stored qualified_names match what
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# the CLI/MCP layer produces (those paths go through _get_store ->
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# _validate_repo_root which .resolve()s). Without this, a later
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# ``code-review-graph update --repo <relative>`` writes the same
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# function under a new absolute-prefixed qualified_name, leaving the
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# graph with duplicate nodes for the same source location.
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repo_path = clone_or_update(config).resolve()
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# Build graph
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from code_review_graph.graph import GraphStore
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from code_review_graph.incremental import full_build, get_db_path
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from code_review_graph.postprocessing import run_post_processing
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db_path = get_db_path(repo_path)
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store = GraphStore(db_path)
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try:
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full_build(repo_path, store)
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# full_build is the parsing-only primitive; the higher-level CLI/MCP
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# wrappers run postprocessing on top. The eval framework bypasses
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# those, so call it directly here. Without this, FTS5 stays empty
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# and downstream benchmarks (token_efficiency, search_quality)
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# silently produce useless results. See: search.rebuild_fts_index.
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pp_result = run_post_processing(store)
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for warning in pp_result.get("warnings", []):
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logger.warning(" postprocessing: %s", warning)
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# run_post_processing's embedding step is a refresh, not a bootstrap:
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# refresh_embeddings() returns early on a graph with no existing
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# vectors, by design, so no build path can silently load a model or
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# incur API cost. The eval framework therefore has to build the index
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# explicitly, or every semantic query returns zero hits and the
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# affected rows are dropped from the aggregate as "no_graph_results".
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if embed:
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_build_embedding_index(
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store, db_path, embedding_provider, embedding_model,
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)
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_warn_if_semantic_index_missing(store, benchmark_names)
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except BaseException:
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store.close()
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raise
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# The embedding table is provider-scoped. A custom provider/model used
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# to build the index must also be used by every semantic query, or the
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# benchmark opens the same table under a different identity and sees
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# zero vectors. Keep these run-only values out of the loaded config.
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benchmark_config = dict(config)
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if embed:
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benchmark_config["_embedding_provider"] = embedding_provider
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benchmark_config["_embedding_model"] = embedding_model
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for bench_name in benchmark_names:
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if bench_name not in BENCHMARK_REGISTRY:
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logger.warning("Unknown benchmark: %s", bench_name)
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continue
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logger.info(" Running %s...", bench_name)
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try:
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bench_fn = BENCHMARK_REGISTRY[bench_name]
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results = bench_fn(repo_path, store, benchmark_config)
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key = f"{name}_{bench_name}"
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all_results[key] = results
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write_csv(results, output_dir / f"{key}_{today}.csv")
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logger.info(" %s: %d result(s)", bench_name, len(results))
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except Exception as e:
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logger.error(" %s failed: %s", bench_name, e)
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all_results[f"{name}_{bench_name}"] = []
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store.close()
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return all_results
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